§ Research · Four pillars

Research

Machine-learning methods for atomistic simulation, molecular properties, crystal-structure prediction, and pharmaceutical development.

§ 01

Research areas

4 themes · 12 publications
§ 02

Publications by theme

1,123 citations · h-index 10 · verified 2026-07-26
01 · 3 papers

ML Potential Architectures

2024
Divide-and-Conquer Potentials Enable Scalable and Accurate Predictions of Forces and Energies in Atomistic Systems
A. Anelli et al.
Digital Discovery (RSC)
Introduced a committee-of-experts architecture for machine learning potentials: multiple specialized models trained on curated subsets, with predictions weighted to favour the most informed expert. This divide-and-conquer philosophy yields potentials that are more accurate than monolithic models with essentially no additional computational cost—a new paradigm for scalable atomistic simulation.
2022
Exploring the Robust Extrapolation of High-Dimensional Machine Learning Potentials
C. Zeni, A. Anelli, A. Glielmo, K. Rossi
Physical Review B
Challenged the assumption that ML potentials merely interpolate training data, demonstrating that 80–100% of test configurations actually lie outside the convex hull of training points. Proposed a probability-density framework to rationalize why these models remain accurate in extrapolation regimes—a finding that redefines how we think about trustworthiness in atomistic ML.
2018
Automatic Selection of Atomic Fingerprints and Reference Configurations for Machine-Learning Potentials
G. Imbalzano, A. Anelli, D. Giofré, S. Klees, J. Behler, M. Ceriotti
The Journal of Chemical Physics
Developed automatic protocols to select optimal atomic fingerprints from large candidate pools using data-intrinsic correlations, dramatically simplifying the construction of neural-network potentials. Applied to water and Al-Mg-Si alloys, the method finds the best trade-off between accuracy and efficiency—making high-fidelity ML potentials accessible without expert hand-tuning.
02 · 4 papers

Structure–Property Learning

2024
Comparative Analysis of Chemical Descriptors by Machine Learning Reveals Atomistic Insights into Solute–Lipid Interactions
J.J. Lange, A. Anelli et al.
Molecular Pharmaceutics
Systematically benchmarked four classes of molecular descriptors—from classical to geometric—to predict drug solubility in lipid excipients, uncovering that hydrogen-bond basicity and melting-point-related solid-state properties are the dominant drivers. By making atomistic interactions interpretable, this work provides rational design rules for lipid-based drug formulations.
2020
Learning the Electronic Density of States in Condensed Matter
C. Ben Mahmoud, A. Anelli, G. Csányi, M. Ceriotti
Physical Review B
Built a machine-learning framework that decomposes the electronic density of states into local, atom-centered contributions—enabling prediction of electronic structure for systems far too large for direct quantum-mechanical calculation. Applied to amorphous silicon across extreme thermodynamic conditions, revealing structure–property relationships invisible to conventional analysis.
2019
A Bayesian Approach to NMR Crystal Structure Determination
A. Anelli, E.A. Engel, A. Hofstetter, F. Paruzzo, L. Emsley, M. Ceriotti
Physical Chemistry Chemical Physics
Fused Bayesian statistics with the ShiftML chemical-shift predictor to quantify confidence in NMR crystal structure identification. Demonstrated on six organic molecular crystals that machine-learned NMR predictions can replace expensive first-principles calculations, opening a practical route for polymorph characterisation in pharmaceutical development.
2018
Generalized Convex Hull Construction for Materials Discovery
A. Anelli, E.A. Engel, C.J. Pickard, M. Ceriotti
Physical Review Materials
Replaced the conventional thermodynamic convex hull with a data-driven, probabilistic construction that maps the full structural diversity of candidate compounds without bias. By working in learned coordinates, the framework identifies synthesizable structures and the experimental constraints most likely to stabilize them—turning crystal structure prediction from a brute-force search into a guided discovery process.
03 · 4 papers

Crystal Structure Prediction

2024
The Seventh Blind Test of Crystal Structure Prediction: Structure Ranking Methods
L.M. Hunnisett, J. Nyman, N. Francia, N.S. Abraham, S. Aitipamula, T. Alkhidir, ... A. Anelli et al.
Acta Crystallographica Section B: Structural Science
Community-wide benchmark of 22 groups ranking crystal structures by stability. Showed that periodic DFT-D methods match experiment within expected margins, while system-specific ML potentials emerged as a viable fast alternative—establishing the state of the art for polymorph energy ranking at industrial scale.
70citations
2024
The Seventh Blind Test of Crystal Structure Prediction: Structure Generation Methods
L.M. Hunnisett, J. Nyman, N. Francia, N.S. Abraham, C.S. Adjiman, ... A. Anelli et al.
Acta Crystallographica Section B: Structural Science
The generation counterpart to the ranking blind test: 21 groups sampled crystal structure landscapes for increasingly complex pharmaceutical targets. Revealed that random search and ML-guided generation now reliably find the experimental polymorph for rigid molecules, but flexible and multi-component systems remain an open frontier.
82citations
2024
Automatic Solid Form Classification in Pharmaceutical Drug Development
J. Lange, L. Komissarov, R. Lang, D.D. Enkelmann, A. Anelli
AI for Accelerated Materials Discovery (AI4MAT), NeurIPS 2024 Workshop
Presented at NeurIPS AI4MAT, this work automates the classification of pharmaceutical solid forms—a bottleneck in early drug development—using ML models trained on diffraction and spectroscopic data. Enables rapid polymorph triage without expert intervention, directly accelerating the path from candidate molecule to developable drug.
3citations
2024
Robust and Efficient Reranking in Crystal Structure Prediction: A Data-Driven Method for Real-Life Molecules
A. Anelli, H. Dietrich, P. Ectors, F. Stowasser, T. Bereau, M. Neumann, J. van den Ende
CrystEngComm
Developed a machine-learning reranking scheme that accelerates crystal structure prediction by orders of magnitude, validated on a diverse set of real pharmaceutical molecules. The speedup unlocks both higher-throughput screening of drug candidates and the use of more accurate levels of theory, pushing CSP from an academic exercise toward an industrial-scale tool.
04 · 1 papers

Agentic AI for Drug Discovery

2025
APPA: Agentic Preformulation Pathway Assistant
A. Anelli et al.
arXiv preprint (2503.16698)
Introduced a first-of-its-kind agentic AI system that couples large language models with experimental databases and machine learning to automate the preformulation pathway for drug candidates. APPA reasons over scientific publications, experimental data, and ML predictions to propose optimal strategies, cutting weeks of manual evidence gathering to minutes.